pCT - User contributions [en]

Software structure

2021-03-22T10:05:13Z

Ppi061: /* Main data path */

This is a brainstorming document for the general software structure of the pCT project and the operation of the full pipeline.

== General guidelines ==
* support multiple programming languages
* open for the programming tools best suited for a specific purpose and development group
* use common/open source packages where ever possible
* every component comes with a unit test

== Software Modules ==
[[File:Software-task-sequence.png]]

=== Main data path ===
* Simulation
** Beam Simulation
** Phantom Simulation
** Detector Propagation
* Detector Response Simulation
* Readout Simulation
* Readout and Raw Data reconstruction
** pct-online
* Detector Reconstruction
** Most likely entrance step and hull algorithm needed for the single-sided setup
** Clustering and Tracking
* Phantom reconstruction
* Imaging

[[File:SignalChain.png|border|1000px]]

=== Utilities ===
* Visualization
* Control
* Monitoring

== Contact information of maintainers/experts for each software module ==

== Build system and package management ==

== Common software modules ==
=== Data model ===
* Bridge Design Pattern [[Media:Bridge_Design_Pattern.pdf]]

=== Common IO ===
=== IPC ===
=== Logging ===
=== Control ===

Main Page

2021-02-09T20:31:43Z

Ppi061: /* Journal Articles */

'''Wiki for the proton CT project'''

== Documentation and Howto's ==

* [[Documentation|General Documentation]] on how to install and use the involved software packages, the development workflow, etc.

* [[Hardware Documentation and Howto's]]

* [[Control & Readout Software Documentation and Howto's]]

* [[ALPIDE Documentation and Papers]]

== [[Publications]] ==
List of publications from the project.

==== Workpackage Reports ====
* [[Media:pCT-WP1-1-Rev2 design recommendations.pdf | pCT-WP1-01-Rev2 Detector design specifications]] (Rev2: Added carrier board thickness recommendations) --- See also submitted article on design optimization
* [[:File:pCT-WP1-02-Rev3 (Radiation environment and electronics).pdf | pCT-WP1-02-Rev3 Radiation environment and placement of electronics]] (Rev2: Updated results and assumptions, Rev3: Updated with 1-10cm results) (Please feel free to contact [mailto:jars@hvl.no Jarle Rambo Sølie] if there are any questions regarding the contents of this document.

==== Theses ====
* Daniel Aadnevik - MSc - 2014 - Extremely high-granularity digital tracking calorimeter for the detection of scattered protons in pCT
* [http://bora.uib.no/bitstream/handle/1956/10412/135279255.pdf?sequence=1&isAllowed=y Kristian Austreim - MSc - 2015 - Proton computed tomography readout testing and detector design]
* [http://bora.uib.no/bitstream/handle/1956/16041/thesis_final.pdf?sequence=1&isAllowed=y Ola Grøttvik - MSc - 2017 - Design of High-Speed Digital Readout System for Use in Proton Computed Tomography]
* [http://bora.uib.no/bitstream/handle/1956/16758/PCT_readout_testing_and_detector_HSchaug.pdf?sequence=1&isAllowed=y Håkon Schaug - MSc - 2017 - Proton Beam Test Of A High Granularity Calorimeter For Proton Computed Tomography]
* [https://brage.bibsys.no/xmlui/bitstream/handle/11250/2434108/16246_FULLTEXT.pdf?sequence=1&isAllowed=y Even Hansen - MSc - 2017 - Charge Diffusion Modelling for a Monolithic Active Pixel Sensor Detector with Application to Proton CT]
* [http://bora.uib.no/handle/1956/17757 Helge Pettersen - PhD - 2018 - A Digital Tracking Calorimeter for Proton Computed Tomography]
* [http://bora.uib.no/handle/1956/18748 Simon Kristian Huiberts - MSc - 2018 - Characterization of the ALPIDE chip using He ions (Data from Australian Micro beam, cluster size characteristics). ]
* [http://bora.uib.no/handle/1956/18058 Viljar Nilsen Ekeland - MSc - 2018 - Characterization of the ALPIDE chip using protons (Data from Oslo beam test, cluster size and LET correlation with different bias voltages).]
* [http://bora.uib.no/handle/1956/18057 Susmita Afroz - MSc - 2018 - Noise and Cluster Size Studies of ALPIDE-CMOS Pixel Sensor for pCT]
* [http://bora.uib.no/handle/1956/918/ Håkon Andreas Underdal - MSc (HVL) - 2019 - Data Acquisition and Testing Software for a Proton Computed Tomography System ]
* [http://bora.uib.no/handle/1956/20857 Silje Grimstad - MSc (HVL) - 2019 - ALPIDE Cluster simulations (Building database of cluster characteristics, simulation of clusters using said database. Position and cluster separation algorithms)].
* Alba Garcia Santos - MSc (Utrecht) - 2019 - Improvements of track reconstruction algorithms in pixel-based pCT calorimeters
* Aleksei Kuleshov - MSc - 2019 - Proton CT monitoring and ALPIDE control (MQTT protocol server, System workflow, GUI implementation).
* [https://bora.uib.no/bora-xmlui/handle/1956/24109 Øistein Jelmert Skjolddal - MSc (HVL) - 2020 Scalable Readout for Proton CT - pRU parser and Root interface.]
* [https://bora.uib.no/bora-xmlui/handle/11250/2716854 Jarle Rambo Sølie - PhD (HVL/UiB) - 2020 A Monte Carlo simulation framework for performance evaluation of a proton imaging system without front trackers.]

==== Journal Articles ====
* Alme, J., Barnaföldi, G.G., Barthel, R., Borshchov, V., Bodova, T., van den Brink, A., et al. A High-Granularity Digital Tracking Calorimeter Optimized for Proton CT. Frontiers in Physics. 2020;8(460).
** Published manuscript: [[Media:10.3389_fphy.2020.568243.pdf | PDF]]
** Frontiers link: [https://www.frontiersin.org/article/10.3389/fphy.2020.568243 doi:10.3389/fphy.2020.568243]

* Pettersen, H.E.S., Volz, L., Sølie, J. R., Alme, J., Barnaföldi, G.G., Barthel, R. et al. Helium Radiography with a Digital Tracking Calorimeter-a Monte Carlo Study for Secondary Track Rejection. Phys. Med. Biol. 2021;66(3):035004.
** Published manuscript: [[Media: Pettersen_2021_Phys._Med._Biol._66_035004.pdf | PDF]]
** IOP Science link: [https://iopscience.iop.org/article/10.1088/1361-6560/abca03 doi:10.1088/1361-6560/abca03]

* Sølie, J.R., Volz, L., Pettersen H.E.S., Piersimoni, P., Odland, O.H., Röhrich, D., et al. Image quality of list-mode proton imaging without front trackers. Phys. Med. Biol. 2020;65(13):135012.
** Published manuscript: [[Media: 10.1088_1361-6560_ab8.pdf | PDF]]
** IOP Science link: [https://iopscience.iop.org/article/10.1088/1361-6560/ab8ddb doi:10.1088/1361-6560/ab8ddb]

* Tambave, G., Alme, J., Barnaföldi, G.G., Barthel, R., Van Den Brink, A., Brons, S., et al. Characterization of monolithic CMOS pixel sensor chip with ion beams for application in particle computed tomography. Nuclear Instruments and Methods in Physics Research Section A 2020;958:162626.
** Published manuscript: [[Media: Tambave-2020-Characterization-of-monolithic-cm.pdf| PDF]]
** Elsevier link: [https://www.sciencedirect.com/science/article/pii/S0168900219311258?via%3Dihub doi:10.1016/j.nima.2019.162626]

* Pettersen, H.E.S., J. Alme, A. van den Brink, M. Chaar, D. Fehlker, I. Meric, O.H. Odland, et al. Proton Tracking in a High-Granularity Digital Tracking Calorimeter for Proton CT Purposes. Nuclear Instruments and Methods in Physics Research A 860C, 51–61. doi:10.1016/j.nima.2017.02.007.
** Published manuscript: [[Media: 1-s2.0-S0168900217301882-main.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0168900217301882 doi:10.1016/j.nima.2017.02.007]
** arXiv link: [https://arxiv.org/abs/1611.02031 arXiv:1611.02031]

* Pettersen, H.E.S., Chaar, M., Meric, I., Odland, O.H., Sølie, J., Röhrich, D. Accuracy of parameterized proton range models; a comparison. Radiation Physics and Chemistry, 144 (C): 295-297 (2018). doi:10.1016/j.radphyschem.2017.08.02
** Published manuscript: [[Media: Comparison of different calculation methods of proton ranges.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0969806X17303869?via%3Dihub 10.1016/j.radphyschem.2017.08.028]
** arXiv link: [https://arxiv.org/abs/1704.08854 arXiv:1704.08854]

* Pettersen, H. E. S., and D. Röhrich. 2017. Kreftbehandling Med Protonterapi Og Proton CT. Fra Fysikkens Verden, December 2017.
** Published article: [[Media: FFV-proton-CT-ensidig.pdf | PDF]]
** [http://norskfysisk.no/filer/FFV/2017/FFV-2017-4.pdf Magazine at norskfysisk.no]

==== In review ====
* Pettersen, H.E.S., Meric, I., Odland, O.H., Shafiee, H., Sølie, J., Röhrich, D. Proton Tracking Algorithm for Pixel Based Range Telescopes for Proton Computed Tomography. Revision submitted to Web of Conferences after the "Connecting the Dots" conference.
** Revised manuscript: [[Media: detector-proton-tracking.pdf | PDF]]

* Pettersen, Helge Egil Seime, Lennart Volz, Jarle Sølie, Dieter Rohrich, and Joao Seco. A Linear Projection Model to Estimate a Proton’s Position in a Pencil Beam For Single Sided Proton Imaging,. Submitted to Physics in Medicine and Biology.
** Submitted manuscript: [[Media: Authors manuscript.pdf | PDF]]

* Pettersen, Helge Egil Seime, Johan Alme, Gergely Gabor Barnafoldi, Alba Garcıa-Santos, Ola Grøttvik, Håvard Helstrup, Kristin Fanebust Hetland, Ilker Meric, Odd Harald Odland, Gabor Papp, Thomas Peitzmann, Dieter Röhrich, Joao Seco, Hesam Shafiee, Eivind Vågslid Skjæveland, Ganesh Tambave, Kjetil Ullaland, Monika Varga-Kofarago, Lennart Volz, Boris Wagner and Shiming Yang. Design Optimization of a Pixel Based Range Telescope for Proton Computed Tomography. Submitted to Physica Medica Special Issue: Advances in Geant4 for medicine.
** Submitted manuscript: [[Media: Pettersen et al. - Design Optimization of a Pixel Based Range Telesco.pdf| PDF]]

==== Work in Progress ====
* J. Sølie, H. E. S. Pettersen, I. Meric, O. H. Odland, H. Helstrup and D. Röhrich: A comparison of longitudinal and lateral range for protons traversing complex media using GATE, MCNP6 and FLUKA Monte Carlo simulations.

== [[Meetings]] ==
Notes and slides from the project meetings

== [[Workshops]] ==
Slides from the project [[Workshops | workshops]]

== [[Workpackages]] ==
Sections for the different work packages

== [[People]] ==
Contact info of involved people

== [[Links]] ==
Link collection of topics regarding the project

== Getting started ==
* Note: ASK is a placeholder that marks questions
* Note: Search function is not ideal. It doesn't find all occurences of the search term, e.g. aries finds libraries but not aries.bccs

* Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]

Main Page

2021-02-09T20:30:25Z

Ppi061: /* Journal Articles */

'''Wiki for the proton CT project'''

== Documentation and Howto's ==

* [[Documentation|General Documentation]] on how to install and use the involved software packages, the development workflow, etc.

* [[Hardware Documentation and Howto's]]

* [[Control & Readout Software Documentation and Howto's]]

* [[ALPIDE Documentation and Papers]]

== [[Publications]] ==
List of publications from the project.

==== Workpackage Reports ====
* [[Media:pCT-WP1-1-Rev2 design recommendations.pdf | pCT-WP1-01-Rev2 Detector design specifications]] (Rev2: Added carrier board thickness recommendations) --- See also submitted article on design optimization
* [[:File:pCT-WP1-02-Rev3 (Radiation environment and electronics).pdf | pCT-WP1-02-Rev3 Radiation environment and placement of electronics]] (Rev2: Updated results and assumptions, Rev3: Updated with 1-10cm results) (Please feel free to contact [mailto:jars@hvl.no Jarle Rambo Sølie] if there are any questions regarding the contents of this document.

==== Theses ====
* Daniel Aadnevik - MSc - 2014 - Extremely high-granularity digital tracking calorimeter for the detection of scattered protons in pCT
* [http://bora.uib.no/bitstream/handle/1956/10412/135279255.pdf?sequence=1&isAllowed=y Kristian Austreim - MSc - 2015 - Proton computed tomography readout testing and detector design]
* [http://bora.uib.no/bitstream/handle/1956/16041/thesis_final.pdf?sequence=1&isAllowed=y Ola Grøttvik - MSc - 2017 - Design of High-Speed Digital Readout System for Use in Proton Computed Tomography]
* [http://bora.uib.no/bitstream/handle/1956/16758/PCT_readout_testing_and_detector_HSchaug.pdf?sequence=1&isAllowed=y Håkon Schaug - MSc - 2017 - Proton Beam Test Of A High Granularity Calorimeter For Proton Computed Tomography]
* [https://brage.bibsys.no/xmlui/bitstream/handle/11250/2434108/16246_FULLTEXT.pdf?sequence=1&isAllowed=y Even Hansen - MSc - 2017 - Charge Diffusion Modelling for a Monolithic Active Pixel Sensor Detector with Application to Proton CT]
* [http://bora.uib.no/handle/1956/17757 Helge Pettersen - PhD - 2018 - A Digital Tracking Calorimeter for Proton Computed Tomography]
* [http://bora.uib.no/handle/1956/18748 Simon Kristian Huiberts - MSc - 2018 - Characterization of the ALPIDE chip using He ions (Data from Australian Micro beam, cluster size characteristics). ]
* [http://bora.uib.no/handle/1956/18058 Viljar Nilsen Ekeland - MSc - 2018 - Characterization of the ALPIDE chip using protons (Data from Oslo beam test, cluster size and LET correlation with different bias voltages).]
* [http://bora.uib.no/handle/1956/18057 Susmita Afroz - MSc - 2018 - Noise and Cluster Size Studies of ALPIDE-CMOS Pixel Sensor for pCT]
* [http://bora.uib.no/handle/1956/918/ Håkon Andreas Underdal - MSc (HVL) - 2019 - Data Acquisition and Testing Software for a Proton Computed Tomography System ]
* [http://bora.uib.no/handle/1956/20857 Silje Grimstad - MSc (HVL) - 2019 - ALPIDE Cluster simulations (Building database of cluster characteristics, simulation of clusters using said database. Position and cluster separation algorithms)].
* Alba Garcia Santos - MSc (Utrecht) - 2019 - Improvements of track reconstruction algorithms in pixel-based pCT calorimeters
* Aleksei Kuleshov - MSc - 2019 - Proton CT monitoring and ALPIDE control (MQTT protocol server, System workflow, GUI implementation).
* [https://bora.uib.no/bora-xmlui/handle/1956/24109 Øistein Jelmert Skjolddal - MSc (HVL) - 2020 Scalable Readout for Proton CT - pRU parser and Root interface.]
* [https://bora.uib.no/bora-xmlui/handle/11250/2716854 Jarle Rambo Sølie - PhD (HVL/UiB) - 2020 A Monte Carlo simulation framework for performance evaluation of a proton imaging system without front trackers.]

==== Journal Articles ====
* Alme, J., Barnaföldi, G.G., Barthel, R., Borshchov, V., Bodova, T., van den Brink, A., et al. A High-Granularity Digital Tracking Calorimeter Optimized for Proton CT. Frontiers in Physics. 2020;8(460).
** Published manuscript: [[Media:10.3389_fphy.2020.568243.pdf | PDF]]
** Frontiers link: [https://www.frontiersin.org/article/10.3389/fphy.2020.568243 doi:10.3389/fphy.2020.568243]

* Pettersen, H.E.S., Volz, L., Sølie, J. R., Alme, J., Barnaföldi, G.G., Barthel, R. et al. Helium Radiography with a Digital Tracking Calorimeter-a Monte Carlo Study for Secondary Track Rejection. Phys. Med. Biol. 2021;66(3):035004.
** Published manuscript: [[Media: Pettersen_2021_Phys._Med._Biol._66_035004.pdf | PDF]]
** IOP Science link: [https://iopscience.iop.org/article/10.1088/1361-6560/abca03 doi:10.1088/1361-6560/abca03]

* Sølie, J.R., Volz, L., Pettersen H.E.S., Piersimoni, P., Odland, O.H., Röhrich, D., et al. Image quality of list-mode proton imaging without front trackers. Phys. Med. Biol. 2020;65(13):135012.
** Published manuscript: [[Media: 10.1088_1361-6560_ab8.pdf | PDF]]
** IOP Science link: [https://iopscience.iop.org/article/10.1088/1361-6560/ab8ddb doi:10.1088/1361-6560/ab8ddb]

* Tambave G, Alme J, Barnaföldi GG, Barthel R, Van Den Brink A, Brons S, et al. Characterization of monolithic CMOS pixel sensor chip with ion beams for application in particle computed tomography. Nuclear Instruments and Methods in Physics Research Section A 2020;958:162626.
** Published manuscript: [[Media: Tambave-2020-Characterization-of-monolithic-cm.pdf| PDF]]
** Elsevier link: [https://www.sciencedirect.com/science/article/pii/S0168900219311258?via%3Dihub doi:10.1016/j.nima.2019.162626]

* Pettersen, H.E.S., J. Alme, A. van den Brink, M. Chaar, D. Fehlker, I. Meric, O.H. Odland, et al. Proton Tracking in a High-Granularity Digital Tracking Calorimeter for Proton CT Purposes. Nuclear Instruments and Methods in Physics Research A 860C, 51–61. doi:10.1016/j.nima.2017.02.007.
** Published manuscript: [[Media: 1-s2.0-S0168900217301882-main.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0168900217301882 doi:10.1016/j.nima.2017.02.007]
** arXiv link: [https://arxiv.org/abs/1611.02031 arXiv:1611.02031]

* Pettersen, H.E.S., Chaar, M., Meric, I., Odland, O.H., Sølie, J., Röhrich, D. Accuracy of parameterized proton range models; a comparison. Radiation Physics and Chemistry, 144 (C): 295-297 (2018). doi:10.1016/j.radphyschem.2017.08.02
** Published manuscript: [[Media: Comparison of different calculation methods of proton ranges.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0969806X17303869?via%3Dihub 10.1016/j.radphyschem.2017.08.028]
** arXiv link: [https://arxiv.org/abs/1704.08854 arXiv:1704.08854]

* Pettersen, H. E. S., and D. Röhrich. 2017. Kreftbehandling Med Protonterapi Og Proton CT. Fra Fysikkens Verden, December 2017.
** Published article: [[Media: FFV-proton-CT-ensidig.pdf | PDF]]
** [http://norskfysisk.no/filer/FFV/2017/FFV-2017-4.pdf Magazine at norskfysisk.no]

==== In review ====
* Pettersen, H.E.S., Meric, I., Odland, O.H., Shafiee, H., Sølie, J., Röhrich, D. Proton Tracking Algorithm for Pixel Based Range Telescopes for Proton Computed Tomography. Revision submitted to Web of Conferences after the "Connecting the Dots" conference.
** Revised manuscript: [[Media: detector-proton-tracking.pdf | PDF]]

* Pettersen, Helge Egil Seime, Lennart Volz, Jarle Sølie, Dieter Rohrich, and Joao Seco. A Linear Projection Model to Estimate a Proton’s Position in a Pencil Beam For Single Sided Proton Imaging,. Submitted to Physics in Medicine and Biology.
** Submitted manuscript: [[Media: Authors manuscript.pdf | PDF]]

* Pettersen, Helge Egil Seime, Johan Alme, Gergely Gabor Barnafoldi, Alba Garcıa-Santos, Ola Grøttvik, Håvard Helstrup, Kristin Fanebust Hetland, Ilker Meric, Odd Harald Odland, Gabor Papp, Thomas Peitzmann, Dieter Röhrich, Joao Seco, Hesam Shafiee, Eivind Vågslid Skjæveland, Ganesh Tambave, Kjetil Ullaland, Monika Varga-Kofarago, Lennart Volz, Boris Wagner and Shiming Yang. Design Optimization of a Pixel Based Range Telescope for Proton Computed Tomography. Submitted to Physica Medica Special Issue: Advances in Geant4 for medicine.
** Submitted manuscript: [[Media: Pettersen et al. - Design Optimization of a Pixel Based Range Telesco.pdf| PDF]]

==== Work in Progress ====
* J. Sølie, H. E. S. Pettersen, I. Meric, O. H. Odland, H. Helstrup and D. Röhrich: A comparison of longitudinal and lateral range for protons traversing complex media using GATE, MCNP6 and FLUKA Monte Carlo simulations.

== [[Meetings]] ==
Notes and slides from the project meetings

== [[Workshops]] ==
Slides from the project [[Workshops | workshops]]

== [[Workpackages]] ==
Sections for the different work packages

== [[People]] ==
Contact info of involved people

== [[Links]] ==
Link collection of topics regarding the project

== Getting started ==
* Note: ASK is a placeholder that marks questions
* Note: Search function is not ideal. It doesn't find all occurences of the search term, e.g. aries finds libraries but not aries.bccs

* Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]

File:Tambave-2020-Characterization-of-monolithic-cm.pdf

2021-02-09T20:28:36Z

Ppi061: File uploaded with MsUpload

File uploaded with MsUpload

Main Page

2021-02-09T20:24:21Z

Ppi061: /* Journal Articles */

'''Wiki for the proton CT project'''

== Documentation and Howto's ==

* [[Documentation|General Documentation]] on how to install and use the involved software packages, the development workflow, etc.

* [[Hardware Documentation and Howto's]]

* [[Control & Readout Software Documentation and Howto's]]

* [[ALPIDE Documentation and Papers]]

== [[Publications]] ==
List of publications from the project.

==== Workpackage Reports ====
* [[Media:pCT-WP1-1-Rev2 design recommendations.pdf | pCT-WP1-01-Rev2 Detector design specifications]] (Rev2: Added carrier board thickness recommendations) --- See also submitted article on design optimization
* [[:File:pCT-WP1-02-Rev3 (Radiation environment and electronics).pdf | pCT-WP1-02-Rev3 Radiation environment and placement of electronics]] (Rev2: Updated results and assumptions, Rev3: Updated with 1-10cm results) (Please feel free to contact [mailto:jars@hvl.no Jarle Rambo Sølie] if there are any questions regarding the contents of this document.

==== Theses ====
* Daniel Aadnevik - MSc - 2014 - Extremely high-granularity digital tracking calorimeter for the detection of scattered protons in pCT
* [http://bora.uib.no/bitstream/handle/1956/10412/135279255.pdf?sequence=1&isAllowed=y Kristian Austreim - MSc - 2015 - Proton computed tomography readout testing and detector design]
* [http://bora.uib.no/bitstream/handle/1956/16041/thesis_final.pdf?sequence=1&isAllowed=y Ola Grøttvik - MSc - 2017 - Design of High-Speed Digital Readout System for Use in Proton Computed Tomography]
* [http://bora.uib.no/bitstream/handle/1956/16758/PCT_readout_testing_and_detector_HSchaug.pdf?sequence=1&isAllowed=y Håkon Schaug - MSc - 2017 - Proton Beam Test Of A High Granularity Calorimeter For Proton Computed Tomography]
* [https://brage.bibsys.no/xmlui/bitstream/handle/11250/2434108/16246_FULLTEXT.pdf?sequence=1&isAllowed=y Even Hansen - MSc - 2017 - Charge Diffusion Modelling for a Monolithic Active Pixel Sensor Detector with Application to Proton CT]
* [http://bora.uib.no/handle/1956/17757 Helge Pettersen - PhD - 2018 - A Digital Tracking Calorimeter for Proton Computed Tomography]
* [http://bora.uib.no/handle/1956/18748 Simon Kristian Huiberts - MSc - 2018 - Characterization of the ALPIDE chip using He ions (Data from Australian Micro beam, cluster size characteristics). ]
* [http://bora.uib.no/handle/1956/18058 Viljar Nilsen Ekeland - MSc - 2018 - Characterization of the ALPIDE chip using protons (Data from Oslo beam test, cluster size and LET correlation with different bias voltages).]
* [http://bora.uib.no/handle/1956/18057 Susmita Afroz - MSc - 2018 - Noise and Cluster Size Studies of ALPIDE-CMOS Pixel Sensor for pCT]
* [http://bora.uib.no/handle/1956/918/ Håkon Andreas Underdal - MSc (HVL) - 2019 - Data Acquisition and Testing Software for a Proton Computed Tomography System ]
* [http://bora.uib.no/handle/1956/20857 Silje Grimstad - MSc (HVL) - 2019 - ALPIDE Cluster simulations (Building database of cluster characteristics, simulation of clusters using said database. Position and cluster separation algorithms)].
* Alba Garcia Santos - MSc (Utrecht) - 2019 - Improvements of track reconstruction algorithms in pixel-based pCT calorimeters
* Aleksei Kuleshov - MSc - 2019 - Proton CT monitoring and ALPIDE control (MQTT protocol server, System workflow, GUI implementation).
* [https://bora.uib.no/bora-xmlui/handle/1956/24109 Øistein Jelmert Skjolddal - MSc (HVL) - 2020 Scalable Readout for Proton CT - pRU parser and Root interface.]
* [https://bora.uib.no/bora-xmlui/handle/11250/2716854 Jarle Rambo Sølie - PhD (HVL/UiB) - 2020 A Monte Carlo simulation framework for performance evaluation of a proton imaging system without front trackers.]

==== Journal Articles ====
* Alme, J., Barnaföldi, G.G., Barthel, R., Borshchov, V., Bodova, T., van den Brink, A., et al. A High-Granularity Digital Tracking Calorimeter Optimized for Proton CT. Frontiers in Physics. 2020;8(460).
** Published manuscript: [[Media:10.3389_fphy.2020.568243.pdf | PDF]]
** Frontiers link: [https://www.frontiersin.org/article/10.3389/fphy.2020.568243 doi:10.3389/fphy.2020.568243]

* Pettersen, H.E.S., Volz, L., Sølie, J. R., Alme, J., Barnaföldi, G.G., Barthel, R. et al. Helium Radiography with a Digital Tracking Calorimeter-a Monte Carlo Study for Secondary Track Rejection. Phys. Med. Biol. 2021;66(3):035004.
** Published manuscript: [[Media: Pettersen_2021_Phys._Med._Biol._66_035004.pdf | PDF]]
** IOP Science link: [https://iopscience.iop.org/article/10.1088/1361-6560/abca03 doi:10.1088/1361-6560/abca03]

* Sølie, J.R., Volz, L., Pettersen H.E.S., Piersimoni, P., Odland, O.H., Röhrich, D., et al. Image quality of list-mode proton imaging without front trackers. Phys. Med. Biol. 2020;65(13):135012.
** Published manuscript: [[Media: 10.1088_1361-6560_ab8.pdf | PDF]]
** IOP Science link: [https://iopscience.iop.org/article/10.1088/1361-6560/ab8ddb doi:10.1088/1361-6560/ab8ddb]

* Pettersen, H.E.S., J. Alme, A. van den Brink, M. Chaar, D. Fehlker, I. Meric, O.H. Odland, et al. Proton Tracking in a High-Granularity Digital Tracking Calorimeter for Proton CT Purposes. Nuclear Instruments and Methods in Physics Research A 860C, 51–61. doi:10.1016/j.nima.2017.02.007.
** Published manuscript: [[Media: 1-s2.0-S0168900217301882-main.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0168900217301882 doi:10.1016/j.nima.2017.02.007]
** arXiv link: [https://arxiv.org/abs/1611.02031 arXiv:1611.02031]

* Pettersen, H.E.S., Chaar, M., Meric, I., Odland, O.H., Sølie, J., Röhrich, D. Accuracy of parameterized proton range models; a comparison. Radiation Physics and Chemistry, 144 (C): 295-297 (2018). doi:10.1016/j.radphyschem.2017.08.02
** Published manuscript: [[Media: Comparison of different calculation methods of proton ranges.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0969806X17303869?via%3Dihub 10.1016/j.radphyschem.2017.08.028]
** arXiv link: [https://arxiv.org/abs/1704.08854 arXiv:1704.08854]

* Pettersen, H. E. S., and D. Röhrich. 2017. Kreftbehandling Med Protonterapi Og Proton CT. Fra Fysikkens Verden, December 2017.
** Published article: [[Media: FFV-proton-CT-ensidig.pdf | PDF]]
** [http://norskfysisk.no/filer/FFV/2017/FFV-2017-4.pdf Magazine at norskfysisk.no]

==== In review ====
* Pettersen, H.E.S., Meric, I., Odland, O.H., Shafiee, H., Sølie, J., Röhrich, D. Proton Tracking Algorithm for Pixel Based Range Telescopes for Proton Computed Tomography. Revision submitted to Web of Conferences after the "Connecting the Dots" conference.
** Revised manuscript: [[Media: detector-proton-tracking.pdf | PDF]]

* Pettersen, Helge Egil Seime, Lennart Volz, Jarle Sølie, Dieter Rohrich, and Joao Seco. A Linear Projection Model to Estimate a Proton’s Position in a Pencil Beam For Single Sided Proton Imaging,. Submitted to Physics in Medicine and Biology.
** Submitted manuscript: [[Media: Authors manuscript.pdf | PDF]]

* Pettersen, Helge Egil Seime, Johan Alme, Gergely Gabor Barnafoldi, Alba Garcıa-Santos, Ola Grøttvik, Håvard Helstrup, Kristin Fanebust Hetland, Ilker Meric, Odd Harald Odland, Gabor Papp, Thomas Peitzmann, Dieter Röhrich, Joao Seco, Hesam Shafiee, Eivind Vågslid Skjæveland, Ganesh Tambave, Kjetil Ullaland, Monika Varga-Kofarago, Lennart Volz, Boris Wagner and Shiming Yang. Design Optimization of a Pixel Based Range Telescope for Proton Computed Tomography. Submitted to Physica Medica Special Issue: Advances in Geant4 for medicine.
** Submitted manuscript: [[Media: Pettersen et al. - Design Optimization of a Pixel Based Range Telesco.pdf| PDF]]

==== Work in Progress ====
* J. Sølie, H. E. S. Pettersen, I. Meric, O. H. Odland, H. Helstrup and D. Röhrich: A comparison of longitudinal and lateral range for protons traversing complex media using GATE, MCNP6 and FLUKA Monte Carlo simulations.

== [[Meetings]] ==
Notes and slides from the project meetings

== [[Workshops]] ==
Slides from the project [[Workshops | workshops]]

== [[Workpackages]] ==
Sections for the different work packages

== [[People]] ==
Contact info of involved people

== [[Links]] ==
Link collection of topics regarding the project

== Getting started ==
* Note: ASK is a placeholder that marks questions
* Note: Search function is not ideal. It doesn't find all occurences of the search term, e.g. aries finds libraries but not aries.bccs

* Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]

File:10.1088 1361-6560 ab8.pdf

2021-02-09T20:21:06Z

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2021-02-09T20:03:57Z

Ppi061: /* Journal Articles */

'''Wiki for the proton CT project'''

== Documentation and Howto's ==

* [[Documentation|General Documentation]] on how to install and use the involved software packages, the development workflow, etc.

* [[Hardware Documentation and Howto's]]

* [[Control & Readout Software Documentation and Howto's]]

* [[ALPIDE Documentation and Papers]]

== [[Publications]] ==
List of publications from the project.

==== Workpackage Reports ====
* [[Media:pCT-WP1-1-Rev2 design recommendations.pdf | pCT-WP1-01-Rev2 Detector design specifications]] (Rev2: Added carrier board thickness recommendations) --- See also submitted article on design optimization
* [[:File:pCT-WP1-02-Rev3 (Radiation environment and electronics).pdf | pCT-WP1-02-Rev3 Radiation environment and placement of electronics]] (Rev2: Updated results and assumptions, Rev3: Updated with 1-10cm results) (Please feel free to contact [mailto:jars@hvl.no Jarle Rambo Sølie] if there are any questions regarding the contents of this document.

==== Theses ====
* Daniel Aadnevik - MSc - 2014 - Extremely high-granularity digital tracking calorimeter for the detection of scattered protons in pCT
* [http://bora.uib.no/bitstream/handle/1956/10412/135279255.pdf?sequence=1&isAllowed=y Kristian Austreim - MSc - 2015 - Proton computed tomography readout testing and detector design]
* [http://bora.uib.no/bitstream/handle/1956/16041/thesis_final.pdf?sequence=1&isAllowed=y Ola Grøttvik - MSc - 2017 - Design of High-Speed Digital Readout System for Use in Proton Computed Tomography]
* [http://bora.uib.no/bitstream/handle/1956/16758/PCT_readout_testing_and_detector_HSchaug.pdf?sequence=1&isAllowed=y Håkon Schaug - MSc - 2017 - Proton Beam Test Of A High Granularity Calorimeter For Proton Computed Tomography]
* [https://brage.bibsys.no/xmlui/bitstream/handle/11250/2434108/16246_FULLTEXT.pdf?sequence=1&isAllowed=y Even Hansen - MSc - 2017 - Charge Diffusion Modelling for a Monolithic Active Pixel Sensor Detector with Application to Proton CT]
* [http://bora.uib.no/handle/1956/17757 Helge Pettersen - PhD - 2018 - A Digital Tracking Calorimeter for Proton Computed Tomography]
* [http://bora.uib.no/handle/1956/18748 Simon Kristian Huiberts - MSc - 2018 - Characterization of the ALPIDE chip using He ions (Data from Australian Micro beam, cluster size characteristics). ]
* [http://bora.uib.no/handle/1956/18058 Viljar Nilsen Ekeland - MSc - 2018 - Characterization of the ALPIDE chip using protons (Data from Oslo beam test, cluster size and LET correlation with different bias voltages).]
* [http://bora.uib.no/handle/1956/18057 Susmita Afroz - MSc - 2018 - Noise and Cluster Size Studies of ALPIDE-CMOS Pixel Sensor for pCT]
* [http://bora.uib.no/handle/1956/918/ Håkon Andreas Underdal - MSc (HVL) - 2019 - Data Acquisition and Testing Software for a Proton Computed Tomography System ]
* [http://bora.uib.no/handle/1956/20857 Silje Grimstad - MSc (HVL) - 2019 - ALPIDE Cluster simulations (Building database of cluster characteristics, simulation of clusters using said database. Position and cluster separation algorithms)].
* Alba Garcia Santos - MSc (Utrecht) - 2019 - Improvements of track reconstruction algorithms in pixel-based pCT calorimeters
* Aleksei Kuleshov - MSc - 2019 - Proton CT monitoring and ALPIDE control (MQTT protocol server, System workflow, GUI implementation).
* [https://bora.uib.no/bora-xmlui/handle/1956/24109 Øistein Jelmert Skjolddal - MSc (HVL) - 2020 Scalable Readout for Proton CT - pRU parser and Root interface.]
* [https://bora.uib.no/bora-xmlui/handle/11250/2716854 Jarle Rambo Sølie - PhD (HVL/UiB) - 2020 A Monte Carlo simulation framework for performance evaluation of a proton imaging system without front trackers.]

==== Journal Articles ====
* Alme, J., Barnaföldi, G.G., Barthel, R., Borshchov, V., Bodova, T., van den Brink, A., et al. A High-Granularity Digital Tracking Calorimeter Optimized for Proton CT. Frontiers in Physics. 2020;8(460).
** Published manuscript: [[Media:10.3389_fphy.2020.568243.pdf | PDF]]
** Frontiers link: [https://www.frontiersin.org/article/10.3389/fphy.2020.568243 doi:10.3389/fphy.2020.568243]

* Pettersen, H.E.S., Volz, L., Sølie, J. R., Alme, J., Barnaföldi, G.G., Barthel, R. et al. Helium Radiography with a Digital Tracking Calorimeter-a Monte Carlo Study for Secondary Track Rejection. Phys. Med. Biol. 2021;66(3):035004.
** Published manuscript: [[Media: Pettersen_2021_Phys._Med._Biol._66_035004.pdf | PDF]]
** Frontiers link: [https://iopscience.iop.org/article/10.1088/1361-6560/abca03 doi:10.1088/1361-6560/abca03]

* Pettersen, H.E.S., J. Alme, A. van den Brink, M. Chaar, D. Fehlker, I. Meric, O.H. Odland, et al. Proton Tracking in a High-Granularity Digital Tracking Calorimeter for Proton CT Purposes. Nuclear Instruments and Methods in Physics Research A 860C, 51–61. doi:10.1016/j.nima.2017.02.007.
** Published manuscript: [[Media: 1-s2.0-S0168900217301882-main.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0168900217301882 doi:10.1016/j.nima.2017.02.007]
** arXiv link: [https://arxiv.org/abs/1611.02031 arXiv:1611.02031]

* Pettersen, H.E.S., Chaar, M., Meric, I., Odland, O.H., Sølie, J., Röhrich, D. Accuracy of parameterized proton range models; a comparison. Radiation Physics and Chemistry, 144 (C): 295-297 (2018). doi:10.1016/j.radphyschem.2017.08.02
** Published manuscript: [[Media: Comparison of different calculation methods of proton ranges.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0969806X17303869?via%3Dihub 10.1016/j.radphyschem.2017.08.028]
** arXiv link: [https://arxiv.org/abs/1704.08854 arXiv:1704.08854]

* Pettersen, H. E. S., and D. Röhrich. 2017. Kreftbehandling Med Protonterapi Og Proton CT. Fra Fysikkens Verden, December 2017.
** Published article: [[Media: FFV-proton-CT-ensidig.pdf | PDF]]
** [http://norskfysisk.no/filer/FFV/2017/FFV-2017-4.pdf Magazine at norskfysisk.no]

==== In review ====
* Pettersen, H.E.S., Meric, I., Odland, O.H., Shafiee, H., Sølie, J., Röhrich, D. Proton Tracking Algorithm for Pixel Based Range Telescopes for Proton Computed Tomography. Revision submitted to Web of Conferences after the "Connecting the Dots" conference.
** Revised manuscript: [[Media: detector-proton-tracking.pdf | PDF]]

* Pettersen, Helge Egil Seime, Lennart Volz, Jarle Sølie, Dieter Rohrich, and Joao Seco. A Linear Projection Model to Estimate a Proton’s Position in a Pencil Beam For Single Sided Proton Imaging,. Submitted to Physics in Medicine and Biology.
** Submitted manuscript: [[Media: Authors manuscript.pdf | PDF]]

* Pettersen, Helge Egil Seime, Johan Alme, Gergely Gabor Barnafoldi, Alba Garcıa-Santos, Ola Grøttvik, Håvard Helstrup, Kristin Fanebust Hetland, Ilker Meric, Odd Harald Odland, Gabor Papp, Thomas Peitzmann, Dieter Röhrich, Joao Seco, Hesam Shafiee, Eivind Vågslid Skjæveland, Ganesh Tambave, Kjetil Ullaland, Monika Varga-Kofarago, Lennart Volz, Boris Wagner and Shiming Yang. Design Optimization of a Pixel Based Range Telescope for Proton Computed Tomography. Submitted to Physica Medica Special Issue: Advances in Geant4 for medicine.
** Submitted manuscript: [[Media: Pettersen et al. - Design Optimization of a Pixel Based Range Telesco.pdf| PDF]]

==== Work in Progress ====
* J. Sølie, H. E. S. Pettersen, I. Meric, O. H. Odland, H. Helstrup and D. Röhrich: A comparison of longitudinal and lateral range for protons traversing complex media using GATE, MCNP6 and FLUKA Monte Carlo simulations.

== [[Meetings]] ==
Notes and slides from the project meetings

== [[Workshops]] ==
Slides from the project [[Workshops | workshops]]

== [[Workpackages]] ==
Sections for the different work packages

== [[People]] ==
Contact info of involved people

== [[Links]] ==
Link collection of topics regarding the project

== Getting started ==
* Note: ASK is a placeholder that marks questions
* Note: Search function is not ideal. It doesn't find all occurences of the search term, e.g. aries finds libraries but not aries.bccs

* Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]

File:Pettersen 2021 Phys. Med. Biol. 66 035004.pdf

2021-02-09T20:01:43Z

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Ppi061: /* Publications */

'''Wiki for the proton CT project'''

== Documentation and Howto's ==

* [[Documentation|General Documentation]] on how to install and use the involved software packages, the development workflow, etc.

* [[Hardware Documentation and Howto's]]

* [[Control & Readout Software Documentation and Howto's]]

* [[ALPIDE Documentation and Papers]]

== [[Publications]] ==
List of publications from the project.

==== Workpackage Reports ====
* [[Media:pCT-WP1-1-Rev2 design recommendations.pdf | pCT-WP1-01-Rev2 Detector design specifications]] (Rev2: Added carrier board thickness recommendations) --- See also submitted article on design optimization
* [[:File:pCT-WP1-02-Rev3 (Radiation environment and electronics).pdf | pCT-WP1-02-Rev3 Radiation environment and placement of electronics]] (Rev2: Updated results and assumptions, Rev3: Updated with 1-10cm results) (Please feel free to contact [mailto:jars@hvl.no Jarle Rambo Sølie] if there are any questions regarding the contents of this document.

==== Theses ====
* Daniel Aadnevik - MSc - 2014 - Extremely high-granularity digital tracking calorimeter for the detection of scattered protons in pCT
* [http://bora.uib.no/bitstream/handle/1956/10412/135279255.pdf?sequence=1&isAllowed=y Kristian Austreim - MSc - 2015 - Proton computed tomography readout testing and detector design]
* [http://bora.uib.no/bitstream/handle/1956/16041/thesis_final.pdf?sequence=1&isAllowed=y Ola Grøttvik - MSc - 2017 - Design of High-Speed Digital Readout System for Use in Proton Computed Tomography]
* [http://bora.uib.no/bitstream/handle/1956/16758/PCT_readout_testing_and_detector_HSchaug.pdf?sequence=1&isAllowed=y Håkon Schaug - MSc - 2017 - Proton Beam Test Of A High Granularity Calorimeter For Proton Computed Tomography]
* [https://brage.bibsys.no/xmlui/bitstream/handle/11250/2434108/16246_FULLTEXT.pdf?sequence=1&isAllowed=y Even Hansen - MSc - 2017 - Charge Diffusion Modelling for a Monolithic Active Pixel Sensor Detector with Application to Proton CT]
* [http://bora.uib.no/handle/1956/17757 Helge Pettersen - PhD - 2018 - A Digital Tracking Calorimeter for Proton Computed Tomography]
* [http://bora.uib.no/handle/1956/18748 Simon Kristian Huiberts - MSc - 2018 - Characterization of the ALPIDE chip using He ions (Data from Australian Micro beam, cluster size characteristics). ]
* [http://bora.uib.no/handle/1956/18058 Viljar Nilsen Ekeland - MSc - 2018 - Characterization of the ALPIDE chip using protons (Data from Oslo beam test, cluster size and LET correlation with different bias voltages).]
* [http://bora.uib.no/handle/1956/18057 Susmita Afroz - MSc - 2018 - Noise and Cluster Size Studies of ALPIDE-CMOS Pixel Sensor for pCT]
* [http://bora.uib.no/handle/1956/918/ Håkon Andreas Underdal - MSc (HVL) - 2019 - Data Acquisition and Testing Software for a Proton Computed Tomography System ]
* [http://bora.uib.no/handle/1956/20857 Silje Grimstad - MSc (HVL) - 2019 - ALPIDE Cluster simulations (Building database of cluster characteristics, simulation of clusters using said database. Position and cluster separation algorithms)].
* Alba Garcia Santos - MSc (Utrecht) - 2019 - Improvements of track reconstruction algorithms in pixel-based pCT calorimeters
* Aleksei Kuleshov - MSc - 2019 - Proton CT monitoring and ALPIDE control (MQTT protocol server, System workflow, GUI implementation).
* [https://bora.uib.no/bora-xmlui/handle/1956/24109 Øistein Jelmert Skjolddal - MSc (HVL) - 2020 Scalable Readout for Proton CT - pRU parser and Root interface.]
* [https://bora.uib.no/bora-xmlui/handle/11250/2716854 Jarle Rambo Sølie - PhD (HVL/UiB) - 2020 A Monte Carlo simulation framework for performance evaluation of a proton imaging system without front trackers.]

==== Journal Articles ====
* Alme, J., Barnaföldi, G.G., Barthel, R., Borshchov, V., Bodova, T., van den Brink, A., et al. A High-Granularity Digital Tracking Calorimeter Optimized for Proton CT. Frontiers in Physics. 2020;8(460).
** Published manuscript: [[Media:10.3389_fphy.2020.568243.pdf | PDF]]
** Frontiers link: [https://www.frontiersin.org/article/10.3389/fphy.2020.568243 doi:10.3389/fphy.2020.568243]

* Pettersen, H.E.S., J. Alme, A. van den Brink, M. Chaar, D. Fehlker, I. Meric, O.H. Odland, et al. Proton Tracking in a High-Granularity Digital Tracking Calorimeter for Proton CT Purposes. Nuclear Instruments and Methods in Physics Research A 860C, 51–61. doi:10.1016/j.nima.2017.02.007.
** Published manuscript: [[Media: 1-s2.0-S0168900217301882-main.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0168900217301882 doi:10.1016/j.nima.2017.02.007]
** arXiv link: [https://arxiv.org/abs/1611.02031 arXiv:1611.02031]

* Pettersen, H.E.S., Chaar, M., Meric, I., Odland, O.H., Sølie, J., Röhrich, D. Accuracy of parameterized proton range models; a comparison. Radiation Physics and Chemistry, 144 (C): 295-297 (2018). doi:10.1016/j.radphyschem.2017.08.02
** Published manuscript: [[Media: Comparison of different calculation methods of proton ranges.pdf | PDF]]
** Elsevier link: [http://www.sciencedirect.com/science/article/pii/S0969806X17303869?via%3Dihub 10.1016/j.radphyschem.2017.08.028]
** arXiv link: [https://arxiv.org/abs/1704.08854 arXiv:1704.08854]

* Pettersen, H. E. S., and D. Röhrich. 2017. Kreftbehandling Med Protonterapi Og Proton CT. Fra Fysikkens Verden, December 2017.
** Published article: [[Media: FFV-proton-CT-ensidig.pdf | PDF]]
** [http://norskfysisk.no/filer/FFV/2017/FFV-2017-4.pdf Magazine at norskfysisk.no]

==== In review ====
* Pettersen, H.E.S., Meric, I., Odland, O.H., Shafiee, H., Sølie, J., Röhrich, D. Proton Tracking Algorithm for Pixel Based Range Telescopes for Proton Computed Tomography. Revision submitted to Web of Conferences after the "Connecting the Dots" conference.
** Revised manuscript: [[Media: detector-proton-tracking.pdf | PDF]]

* Pettersen, Helge Egil Seime, Lennart Volz, Jarle Sølie, Dieter Rohrich, and Joao Seco. A Linear Projection Model to Estimate a Proton’s Position in a Pencil Beam For Single Sided Proton Imaging,. Submitted to Physics in Medicine and Biology.
** Submitted manuscript: [[Media: Authors manuscript.pdf | PDF]]

* Pettersen, Helge Egil Seime, Johan Alme, Gergely Gabor Barnafoldi, Alba Garcıa-Santos, Ola Grøttvik, Håvard Helstrup, Kristin Fanebust Hetland, Ilker Meric, Odd Harald Odland, Gabor Papp, Thomas Peitzmann, Dieter Röhrich, Joao Seco, Hesam Shafiee, Eivind Vågslid Skjæveland, Ganesh Tambave, Kjetil Ullaland, Monika Varga-Kofarago, Lennart Volz, Boris Wagner and Shiming Yang. Design Optimization of a Pixel Based Range Telescope for Proton Computed Tomography. Submitted to Physica Medica Special Issue: Advances in Geant4 for medicine.
** Submitted manuscript: [[Media: Pettersen et al. - Design Optimization of a Pixel Based Range Telesco.pdf| PDF]]

==== Work in Progress ====
* J. Sølie, H. E. S. Pettersen, I. Meric, O. H. Odland, H. Helstrup and D. Röhrich: A comparison of longitudinal and lateral range for protons traversing complex media using GATE, MCNP6 and FLUKA Monte Carlo simulations.

== [[Meetings]] ==
Notes and slides from the project meetings

== [[Workshops]] ==
Slides from the project [[Workshops | workshops]]

== [[Workpackages]] ==
Sections for the different work packages

== [[People]] ==
Contact info of involved people

== [[Links]] ==
Link collection of topics regarding the project

== Getting started ==
* Note: ASK is a placeholder that marks questions
* Note: Search function is not ideal. It doesn't find all occurences of the search term, e.g. aries finds libraries but not aries.bccs

* Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]

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2021-02-09T19:40:32Z

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